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memory problem
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split champ.load for large number of samples
memory problem
champ.load
7.2 years ago
petra.lenzini
• 0
0
votes
4
replies
1.4k
views
DESeq2 memory allocation question
deseq2
memory problem
updated 7.3 years ago by
Michael Love
43k • written 7.3 years ago by
rbronste
▴ 60
1
vote
2
replies
1.5k
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data
methylmix
memory problem
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
perdedorium
• 0
0
votes
1
reply
1.2k
views
ProcessAmplicons using very little memory on big job?
edgeR
processamplicons
memory problem
7.6 years ago
sdalin
• 0
0
votes
3
replies
2.3k
views
GAIA package Error: cannot allocate vector of size 852.1 Mb
memory problem
gaia
updated 8.2 years ago by
Sandro Morganella
▴ 40 • written 8.2 years ago by
drusmanbashir
• 0
2
votes
3
replies
2.1k
views
Problem with memory limit in Rstudio/Windows when importing Affymetrix HTA 2.0 CEL files with oligo R package
oligo
hta2.0
affymetrix microarrays
memory problem
updated 8.8 years ago by
James W. MacDonald
68k • written 8.8 years ago by
svlachavas
▴ 840
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Answer: Bulk RNAseq analysis for
by
Gordon Smyth
53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo
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a2a2haa
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By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…
Answer: Bulk RNAseq analysis for
by
James W. MacDonald
68k
In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
Comment: Jobs at Ensembl
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frostybuddyy
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I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics
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mudasarnaeem2020
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Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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